Installation

Clone the repository and change directory:

$ git clone https://github.com/pnnl/isicle.git
$ cd isicle/

Use conda (or, more efficiently, mamba) to create a virtual environment with required dependencies. Only 64-bit Linux and Mac (excluding mobcal-shm) platforms are supported due to dependency requirements.

On Mac:

$ conda env create -f envs/osx.yml
or
$ mamba env create -f envs/osx.yml

On Linux:

$ conda env create -f envs/linux.yml
or
$ mamba env create -f envs/linux.yml

Activate the virtual environment:

$ conda activate isicle

Install ISiCLE using pip:

$ pip install -e .